Jamplayer is a tool you might find handy to program some devices from Altera under Linux.
Sadly I can't find anybody from which I can even ask to relicense this tools. I have a bunch of simple fixes and patches. Thus for the moemnt I have just uploaded everything at the form of a Debian diff (the Debian source package without the tarball itself).
All of my changes are included in two patches under debian/patches. There are no direct patches. It builds under Debian Lenny, though there are still some warnings (see the build log).